Wakha Rgyal Monastery's history is not extensively documented, but it is believed to be several centuries old, possibly dating back to the 16th century or earlier. It is associated with the Gelugpa (Yellow Hat) school of Tibetan Buddhism. Over the centuries, the monastery has played a significant role in the spiritual and cultural life of the region, serving as a center for learning and meditation. Its location along ancient trade routes may have contributed to its development as a place of refuge and spiritual guidance for travelers.